Bad Stuff...
There are some things that you really should avoid... The packaging of many substrates claim that they are completely digestible. However, please be very wary of claims from the manufacturers of these products! Unlike products for human consumption or use, the safety of products used for our pets is under no such regulation.

Heat rocks: Most reptiles, and Bearded Dragons, have their heat receptors on their backs, not their tummies. In the wild they may sit on a hot rock, pavement, or sand- but it will eventually cool as their body shades it. Prolonged exposure to even moderately high temperatures through their underside can cause burns or internal organ damage (cooking) It may not happen right away, but it has happened frequently. Do not use under belly electrical heat sources. Even if they work fine at first, and do not damage your reptile, I have noticed that they often get hotter as time goes by. Don't risk it. There are one or two products that only heat a few degree's above room temperature, these can be used with caution at night if the cage temperature drops too low, but avoid all under belly heat sources that hold a steady higher temperature.

Calcium Sand: Nothing that encourages ingestion is good flooring. Avoid calcium sand! Sometimes dragons will resort to eating this, because their bodies are telling them they're getting nutrients from it, and too much will cause impaction. Give them the calcium they need through their food, not the stuff they walk and poop on.

Ground Walnut Shells: These will rip up your dragons intestinal wall, regardless of what the packaging says. I know of several deaths due to this product, my first dragon included. A necropsy report by the vet noticed damage to the intestinal lining caused by these, which were in her poo but not causing blockage. The rips made it difficult for her to absorb water which eventually led to her death. Here is an autopsy of another dragon that died because of this supposedly safe substrate. In this case it was impaction.

Soil, Wood Shavings, Bark: Sure dragons may encounter dirt and bark in the wild, but when they're stuck in a cage with it they're more likely to ingest it with food. Avoid the risk, go with something you know they can pass through their digestive system.

Beach Sand: When I lived in Florida I thought it would be cool, and cheap, to use beach sand. Then I got chewed out by my vet. Beach sand clumps too easily, at least if it's from the Gulf and Atlantic, so it's really bad to use in a bearded dragon cage. Even a little, if ingested, can cause impaction. All sand is NOT the same though, but as a rule, don't use beach sand unless you can ask an experienced herp vet or breeder if the sand in your area is safe.

Pebbles and Small Rocks: This should be self-explanatory. Anything small enough to fit in your dragons mouth can be ingested. If it is not digestible, or if it's sharp, it can cause serious problems. If you use rocks in your dragons enclosure, make sure nothing is smaller than its head.

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